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Feb 2016
2 months later

At least part of your problem sounds like a toolhead offset issue. They may be wrong or blank.

If your right extruder works fine, write down your home axes from the printer settings.

Measure the difference between the two extruder heads (or look it up for your model).

Then, check your toolhead offsets. Is it the home axes minus the difference between the left extruder and the right?

I had a similar issue in the x plane and found that the settings were off by a factor of ten. I’ve got a different printer than you, but I’m running sailfish and that fixed me.

Not sure about the z plane issue, sorry!